dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_00999
Location and strand information: 1249014 - 1249943 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6369
Protein molecular weight: 35291.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01000
Location and strand information: 1249950 - 1250903 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.2199
Protein molecular weight: 35645.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01001
Location and strand information: 1251070 - 1254387 (-)
Family: 1.B.14.6.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01002
Location and strand information: 1254732 - 1256675 (+)
Family: HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01003
Location and strand information: 1256900 - 1257982 (-)
Family: null
Protein type: null
Protein description: N-acetylhexosamine 1-kinase

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01004
Location and strand information: 1258056 - 1259456 (-)
Family: GH109
Protein type: CAZyme
Protein description: Glycosyl hydrolase family 109 protein 1
Protein isoelectric point: 5.9865
Protein molecular weight: 51282.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01005
Location and strand information: 1259662 - 1262001 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3018
Protein molecular weight: 87762.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01006
Location and strand information: 1262403 - 1263716 (+)
Family: null
Protein type: null
Protein description: Lysine-sensitive aspartokinase 3

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01007
Location and strand information: 1263789 - 1265087 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1386
Protein molecular weight: 49394.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01008
Location and strand information: 1265234 - 1265827 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01009
Location and strand information: 1266063 - 1268396 (+)
Family: GH95|CBM51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4194
Protein molecular weight: 86077.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01010
Location and strand information: 1268602 - 1270944 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8197
Protein molecular weight: 88288.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01011
Location and strand information: 1271312 - 1271677 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01012
Location and strand information: 1271846 - 1273381 (-)
Family: 3.A.1.128.6
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001385_1|CGC21
Gene ID: MGYG000001385_01013
Location and strand information: 1273442 - 1275361 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.5155
Protein molecular weight: 72054.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001385_00999	GT2_e1621
MGYG000001385_01000
MGYG000001385_01004	GH109_e6
MGYG000001385_01005	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan
MGYG000001385_01007	GH29_e48\|3.2.1.63	hostglycan
MGYG000001385_01009	GH95_e0\|CBM51_e13\|3.2.1.63\|3.2.1.-	xylan\|pectin
MGYG000001385_01010
MGYG000001385_01013	GH97_e17

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001385_00999	hypothetical protein	CAZyme	1249014	1249943	+	GT2
MGYG000001385_01000	hypothetical protein	CAZyme	1249950	1250903	-	GT2
MGYG000001385_01001	hypothetical protein	TC	1251070	1254387	-	1.B.14.6.3
MGYG000001385_01002	Sensor histidine kinase RcsC	STP	1254732	1256675	+	HisKA\| HATPase_c\| Response_reg
MGYG000001385_01003	N-acetylhexosamine 1-kinase	null	1256900	1257982	-	APH
MGYG000001385_01004	Glycosyl hydrolase family 109 protein 1	CAZyme	1258056	1259456	-	GH109
MGYG000001385_01005	hypothetical protein	CAZyme	1259662	1262001	-	GH92
MGYG000001385_01006	Lysine-sensitive aspartokinase 3	null	1262403	1263716	+	AA_kinase
MGYG000001385_01007	hypothetical protein	CAZyme	1263789	1265087	+	GH29
MGYG000001385_01008	hypothetical protein	null	1265234	1265827	-	Pro_isomerase
MGYG000001385_01009	hypothetical protein	CAZyme	1266063	1268396	+	GH95\| CBM51
MGYG000001385_01010	hypothetical protein	CAZyme	1268602	1270944	-	GH106
MGYG000001385_01011	L-rhamnose mutarotase	null	1271312	1271677	+	rhaM
MGYG000001385_01012	Vitamin B12 import ATP-binding protein BtuD	TC	1271846	1273381	-	3.A.1.128.6
MGYG000001385_01013	Retaining alpha-galactosidase	CAZyme	1273442	1275361	-	GH97
Protein ID	Protein Name	Type	Start	End	Strand	Signature